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Exact(37)
If it is found to be contained in one of them, the candidate sequence is aligned by simply copying the matching part of the alignment of the reference sequence.
The manner in which these examples were constructed could be described as "partial common ancestry", and raise the question of what model should be preferred when sequences are forcibly aligned in such a way that part of the alignment is true homology and part is not.
"As part of the alignment, THQ is in the process of exiting its relationships with kids' licensed entertainment companies but will continue to sell certain previously released titles," the company said.
Route 27 was part of the alignment through New Jersey of the Lincoln Highway, the United States' first transcontinental highway that was established in 1913.
The zebra finch sequence does not cover this part of the alignment, but the core sequence is intact in the green anole lizard (Anolis carolinensis) (data not shown).
To avoid misleading results attributable to missing N-terminal and C-terminal ends of sequences, only the central part of the alignment was used in which gaps of unidentified sequences had to be filled with replacement characters within the sequences of P. interpunctella, B. anynana, and the FMO of E. acrea (EaFMO).
Similar(23)
Just Part of the alignments which showed the biggest changes have been illustrated.
For each such alignment, we marked all the positions of the source genomes which were part of the alignments.
Infocon identifies blocks of high information content (BHIC) in parts of the alignment and optionally calculates a consensus sequence in each block.
Therefore, we fix parts of the alignment and collapse only the remaining portions.
Inconsistent alignment procedures in separate parts of the alignment could also influence the accurateness of the resulting phylogeny.
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CEO of Professional Science Editing for Scientists @ prosciediting.com