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The depth of their parental linkage is shallow at best, however.
Therefore, the markers in the two parental linkage groups could not integrate into one group.
The construction of parental linkage maps was carried out adopting the 'two-way pseudo-testcross' mapping strategy [ 33].
The molecular markers used to produce the parental linkage maps and the genome coverage are summarized in Table 3.
The congruence between parental linkage groups was best at LOD 3.5 for Borneo and LOD 5 for P. Lilin.
The first three of these pairs, which appeared in both parental linkage maps, were treated as candidate anchor markers.
Similar(37)
Until now, most quantitative trait loci (QTLs) were identified using bi-parental linkage mapping populations.
It thus indicated the quantitative inheritance pattern of seed traits under study in the developed mapping population and its utility in seed weight trait-specific bi-parental linkage mapping.
Genome-wide association (GWAS) mapping, a specific association mapping stage, is a powerful complementary strategy for an alternation of classical bi-parental linkage mapping to dissect complex traits by using the naturally occurring population [ 26].
To overcome these limitations, the analysis of a wider genetic background is rapidly becoming the main strategy for the dissection of complex genetic architecture in plants, establishing genotype-phenotype association complementary to bi-parental linkage mapping [ 30- 36].
While the genetic basis of FT has been widely studied in cereals by bi-parental linkage mapping and expression profiling, exploitation of the allelic and phenotypic variation of FT in rye by association studies has lagged behind [ 20, 21, 24].
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