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We found a unique set of parameters that generated histograms very similar in shape and in pH-dependence of dwell time to our experimental data from WNV VLPs.
The parameters that generated a higher level of uncertainty were identified and variance reported.
As we know the model and parameters that generated this population, both models 2 and 3 are incomplete.
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In order to identify the set of parameters that generate the probabilities, a constant must be imposed.
For the probabilities to sum to 1, divide exp(xβ m ) by (mathop sum limits_{j = 1}^{J} { exp }({x}_{i}{beta}_{j} ).) Although the probability sum is 1, the set of parameters that generate the probabilities is not identified since more than one set of parameters can generate the same probabilities.
We identified parameters that generate the best classification of C. elegans chemosensory gene families, which we found to be E-value threshold = 0.001 and inflation value = 1.2.
The proposed two-step method explores multiple plausible solution vectors for kinetic parameters that generate target features or satisfy a fitness function.
We therefore limit ourselves only to parameters that generate graphs with an average number of 50 000 edges (roughly twice the number of edges in the yeast PPI graph).
We performed an exhaustive search of the parameter space defined by U and s in order to characterize the set of parameters that generate data consistent with the empirical observations for clonal death: 20 extinctions in 20 populations and 16 bottlenecks, and a mean and variance in time to extinction of 8.55 and 16.15 bottlenecks, respectively (see Methods).
We simulated z-statistics and investigated the performance of the various estimators in recovering the underlying parameter that generates the statistics.
In bifurcation diagrams, y-axis represents equilibria of state variable and x-axis represents value of system parameter that generates equilibria.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com