Sentence examples for parameter inflation from inspiring English sources

Another possibility is using the Markov chain clustering algorithm [29] that may reduce to a big extent the number of ties, but which depends on the selection of a parameter (inflation factor) that is set up by the researcher.

The sizes of the TRIBE-MCL [ 15] clusters are influenced by the parameter inflation value.

The main clustering parameter, inflation value (r), was selected as default (r = 2.5).

The main clustering parameter, inflation value (r), was selected as a compromise between sensitivity and specificity of clustering.

The clustering results were influenced by parameter inflation; the number of clusters increased steadily as inflation became larger (Additional file 1: Table S 1).

The sizes of TRIBE-MCL clusters are influenced by the parameter inflation value (r), which is limited to values between 1.1 and 4.5.

The LRW algorithm uses the following parameters: inflation exponent r, maximum number of iterations (T_{max}), small value (epsilon), merging threshold (tau) and local clustering threshold (eta).

We used several TribeMCL parameters Inflation (1.2, 2, 3 and 5) and BLAST E-values (E = 10) for family clustering.

We clustered these ortholog pairs into groups with multiple species using the Markov Clustering Algorithm software with default parameters (inflation = 2 and scheme = 7).

An important advantage of this algorithm is that it only requires to provide one parameter, the Inflation, which takes values in [1.1, 10.0] and determines the cluster granularity (the higher the Inflation value, the higher the granularity).

MCL also has one parameter, the inflation number.