Sentence examples for pam function from inspiring English sources
The optimal number of clusters was determined to be 2 by using silhouette analysis (using the pam function) on a series ranging from 2 to 20 clusters.
Experimental data suggest that such pulmonary effects could involve disrupted PAM function and airway remodeling resulting in impaired clearance of pulmonary pathogens.
The PSPMs for each motif were clustered based on Euclidian distance using the PAM function in R [ 56] and the clustering result with the maximum average silhouette was chosen.
Collectively, these data suggest As disrupts pulmonary defense through mechanisms involving i) altered PAM function, ii) decreased AE chloride secretion resulting in depressed clearance of pathogens, and iii) AE remodeling due to impaired wound response, ultimately promoting chronic lung diseases such as bronchiectasis.
A further study concerning the effect of the VR-2332 PRRstrainaiNA(NA PRRSV) on PAM function utilized serial analysis of gene expression and demonstrated that expression of MX1 and USP were significantly up-regulated 24 hours post-infection (h pi) [ 9].
Clustering of isoapostatic genes that are mapped in the feature space was classified by the partitioning around medoids method, a variant of the "k-means" method (Kaufman and Rousseeuw 1990) using the "pam" function in the cluster package (version 1.11.0) in the R software platform, with the default parameter settings.
We use the UPGMA tree of the OTUs based on the OTU distance matrix calculated under the K80 nucleotide substitution model (Felsenstein, 2004), QIIME (FastTree algorithm and partition the 856 OTUs into 20 clusters using Partitioning Around Medoids (PAM) ('pam' function from R package 'cluster') based on patristic distances (the length of the shortest path linking two OTUs on the tree).
A high degree of synergistic enhancement of L-PAM cytotoxicity in the presence of BSO was observed in multidrug-resistant neuroblastoma cell lines, including those that were established at relapse after myeloablative therapy with L-PAM and lines highly resistant to L-PAM due to loss of p53 function, especially at concentrations of L-PAM that were myeloablative.
Naturally acquired antibodies protect against PAM as a function of parity through a mechanism that appears to be IgGs blocking binding of PE to CSA [3] [5].
Rather, PAM-MB circuits function to reinforce both aversive and appetitive olfactory responses (Waddell, 2013).
The PCOMS group had higher motivation for treatment compared with the treatment as usual group, and there were improvements within the PCOMS group of patient activation (PAM) and patient functioning (ORS).
