Sentence examples for pairing preference from inspiring English sources

Therefore, the amino acid composition and the residues pairing preference of the sites under coevolution and positive selection can provide a better insight in terms of protein evolution.

Our aim is to provide a better insight into the patterns of groups of non-independent sites and positively selected sites as well as to find their amino acid composition, pairing preference, and spatial distribution.

It has been shown that in five gamma proteobacteria, Bacillus subtilis and two yeasts, the A-site codons decoded by the same tRNA have similar patterns of P-site codon pairing preference [ 16].

However, due to the weak coevolution signal of residues within β-sheet, the coevolution information has not been considered directly in predicting β-strand pairing preference (Steward and Thornton, 2002; Cheng and Baldi, 2005; Lippi and Frasconi, 2009).

Several statistical studies have investigated the AA frequencies and the pairing preference for the protein-protein interaction interface.

Moreover, the groups of non-independent residues have their pairing preference.

Autotetraploids are modeled here as extreme autotetraploids, that is, without pairing preferences between chromosomes.

In this paper, we propose a transductive method which extracts paired preference information from the unlabeled test data.

In Experiment 2, we investigate what factors influence color harmony ratings and how they relate to pair preference ratings.

A third factor that clearly contributes to pair preference in most of the best-fitting regression models is lightness contrast.

Experiment 3, therefore, measures perceived color similarity of the same color pairs using the same BCP participants who previously made the preference and harmony ratings to examine more closely its relation to pair preference and pair harmony.