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We constructed an shRNA against mouse Atg5 using the following oligo pair (sense and antisense strands are underlined while the loop is italicized): forward 5'-TGGATGAGATAACTGAAAGATTCAAGAGA TCTTTCAGTTATCTCATCCTTTTTTC-3'; reverse 5'-TCGAGAAAAAAGGATGA GATAACTGAAAGATCTCTTGAATCTTTCAGTTATCTCATCCA-3'.
As reference s16 ribosomal protein messenger RNA was included using the following primer pair: sense GATATTCGGGTCCGTGTGA; reverse TTGAGATGGACTGTCGGATG.
A 260-bp DNA fragment around rs2431697 was amplified with the primer pair: sense primer: 5′-AGAGGGGGTGAAAGAAGGAA-3′ and antisense primer: 5′-TTCTCAGTGCCAATGTGAGG-3′.
A second primer pair (sense oligonucleotide 5'-GACTGGAACTTGCAACTG-3' and antisense oligonucleotide 5'-GACGGTACAGGAAACAGAT-3') was used to amplify a 445 bp cDNA fragment from nucleotides +24 to +468 of mt2 short transcript (gb| BC049475|).
A one-step RT-PCR was carried out essentially as described [ 2] using the degenerate primer pair (sense primer 5′-GCTCTAGAATTGTTAATGARTACGGTCG-3′ and antisense primer, 5′-CACGCGTCIACCTATTTIGGRTTITG-3′) derived from conserved terminal domains of the CP gene.
A fourth primer pair (sense oligonucleotide 5'-AGGCTGCTTCAGGAGACC-3' and antisense oligonucleotide 5'-CCTAAAGAAGTGACGGTACC-3') was used to amplify a 769 bp cDNA fragment from nucleotides +550 to +1318 of ccnb1 transcript (gb| AB040435|).
Similar(51)
In the sensing phase, a CR pair senses the availability of the selected data channel and once the selected data channel is idle, the CR sender starts sending data packets.
The pol β(E295K) mutation alters a critical residue in the sensor effector coupling pathway that constitutes the functional connection between correct base pair sensing and catalytic activation.
In S-AS gene pairs, sense gene usually refers to the protein-coding gene, while the antisense partner can be either coding or non-coding.
Corresponding riboprobe pairs (sense and antisense) were then synthesized (Megascript high yield in vitro transcription kit, Ambion), purified (MEGAClear purification kit, Ambion), resuspended at 100 ng/µl in RNA storage solution (Ambion) and held at −80°C until use.
The Cerulean (kind gift from Dr. Piston, Vanderbilt University, USA) coding sequence was amplified using the following primer pairs: sense primer with a NotI site: 5'- CAGTCCTGCGGCCGCATGGTGAGCAAGGGCGAGGAGCTG -3' and antisense primer with a BamHI site: 5'- TCAGGATCCGAGAGTGATCCCGGCGGCGGTCACG AACTC -3'.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com