Sentence examples for packages to obtain from inspiring English sources

LINGO, CPLEX and GAMS are the most commonly used software packages to obtain optimal solutions for mathematical programming models (Agrawal et al. 2015; Esmailnezhad et al. 2015; Anbumalar and Raja Chandra Sekar 2015; Pinheiro et al. 2016; Azadeh et al. 2015; Kasimbeyli et al. 2010).

For the relative gene expression in rice and nematode samples, data were analyzed using the MxPro software package to obtain the relative expression levels of rice genes.

Mineralogical analysis of the coal samples were performed by means of X-ray diffraction (XRD) with Ni-filtered CuKα radiation at (10° 70°)/(2θ) at a scan rate of 2°/min (Discoverver Bruker) using High Score Plus software package to obtain quantitative mineral proportion.

Coding sequences were aligned using ClustalW under the Mega3 package to obtain inframe alignment of codons.

Noncompartmental analysis was performed using the PK package to obtain AUC0 ∞ (midazolam) or AUC0 6 (nifedipine).

The 94 network features were combined into SVM using the liblinear package to obtain a ranking model.

The Progenesis analysis results were further processed using the SafeQuant R package to obtain protein relative abundances.

Digital images illuminating nick sites in raw DNA molecules from BioNano Genomics Irys system were processed by IrysView package to obtain basic labelling and DNA length information.

The consensus of these trees was derived using the Consense program of the Phylip package to obtain the bootstrapped ML tree.

The expression value of each transcript was calculated and normalized according to the RESM-based algorithm using the perl scripts in the Trinity (v2012-06-08) package tobtainin FPKM values.

A single crystal of selenomethionyl-derivitized BtMinpp was used to collect a SAD data set, which was processed using the CCP4 package to obtain a crystal structure as described in the Supplemental Information.