Sentence examples for packages to detect from inspiring English sources

When invoked, the Update Checker takes the information from these databases and the Repository Cache and matches installed and available packages to detect obsolete software and stores the results in the Result Cache. Figure 1 Update Checker architecture.

In preparation for creating the microRNA target track, we first used a number of Bioconductor packages to detect the genes in the microarray experiment with significantly increased expression.

Although several recent studies have introduced new software packages to detect differential expression from RNA-seq data sets and the authors have shown their improved performance over previous methods in selected data sets, only few independent comparisons have been published so far.

The model shown uses the Autodesk Revit Architecture software package to detect planes in a user-guided way.

Gautier, M. & Vitalis, R. rehh: an R package to detect footprints of selection in genome-wide SNP data from haplotype structure.

IBM has a rival offering, as well as one using radio-frequency identification (RfID) chips, which are embedded in packaging to detect tampering and allow precise tracking.

To predict the target mRNAs of the lncRNAs, we used the WGCNA (weighted gene co-expression network analysis)18 R software package to detect similar expression patterns between the SDE lncRNAs and mRNAs.

We again used the COPA package to detect the differentially expressed miRNAs between the normal and tumor samples.

Then, we used the SAMtools package to detect possible polymorphic or heterogeneous sites from the alignment (11 ).

ReadDepth is also an R package to detect CNVs by measuring the depth of coverage in the sequencing data.

Here, we present Model based Interaction Calling from ChIA-PET data (MICC), an easy-to-use R package to detect chromatin interactions from ChIA-PET sequencing data.