Sentence examples for packages to compute from inspiring English sources

Multiple sequence alignments of all data-mined ITS sequences were generated using M-Coffee [ 72] which uses other packages to compute the alignments and uses T-Coffee to combine all of these alignments into one unique final alignment.

The size of the eigenvectors is equal to number of variables and the eigenvectors are orthogonal to each other, i.e. V 1 ¯ V ¯ 2 = 0. We have used R, rgl and lattice packages to compute the matrix of variable loadings, rotated data and to plot rotated variables.

As already mentioned, we have used the UCINET 6 software package to compute the social network metrics.

The mediation hypotheses showed in Fig. 1 were tested using the SPSS PROCESS macro (Hayes, 2013), a procedure implemented under the SPSS statistical package to compute and test mediation effects.

GDDA-BLAST utilizes rps-BLAST in NCBI BLAST 2.2.15 package to compute the alignments.

The open-source integrated software system BRB-ArrayTools (Dr. Richard Simon and BRB-ArrayTools Development Team) [21] was used and the CEL files were collated with RMA (robust multi-array average) [22] method and "affy" R/Bioconductor package to compute probeset summaries [23].

We used the heatmap.2 function of the gplots R package to compute and plot the results of the clustering.

Solvent accessibility was calculated using the routine available in the PSA routine in JOY package to compute the Ooi number.

For practical use, we propose an R package to compute the MRS. The adaptation of the SCM can be computed by using many statistical software.

We intended to employ the Expokit package to compute the exponential of a seven-point stencil that is used to approximate the first derivative.

It features an anatomically guided sampling method to retrospectively eliminate problematic data and a parallel Monte Carlo software package to compute the Jacobian matrix for the inverse problem.