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At follow-up, patients were asked to bring their medication boxes/pill packages to assess current medication.
The count data for each library was then fed through the DESeq [ 71] and edgeR [ 72] packages to assess statistically significant DE between all pairwise combinations of polyp types, including a comparison between male and female gonozooids.
Quality control was first performed using the 'affy' and 'affyPLM' R packages to assess the distribution of probe-levels effects via the RLE and PLM methods (Gautier et al., 2004).
This paper provides empirical guidance for selecting methods readily available in statistical packages to assess the health effects of environmental exposures in a multipollutant framework under conventional cross-sectional and time-series studies.
As a consequence, the CDL embarked on an evaluation of ten data linkage software packages to assess their suitability for inclusion in a large scale automated production environment [ 18, 19].
Each of the three obtained data sets (Filter15, Filter25, and Filter30) was then assembled de novo using two different software packages to assess the occurrence of opsin transcripts in a broader methodological framework: CLC Genomics Workbench v5.1 (CLC bio, Århus, Denmark), and IDBA-Tran v1.1.0 (Peng et al. 2013).
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We conducted bootstrap and interior branch tests available in the MEGA 3.1 package to assess statistical significance of the phylogenetic trees.
The gel was then sequentially scanned at all three wavelengths using the Typhoon 9410 Imager (GE Healthcare, NJ) and images exported into the DeCyder (GE Healthcare, NJ) software package to assess differentially expressed protein spots.
Initial quality control checks were performed using functions in the methylumi package to assess concordance between reported and genotyped gender.
All Affymetrix (Santa Clara, CA).cel files were first analyzed by Bioconductor's SimpleAffy package to assess data quality [ 14].
Amidst the excitement of agreeing the supply, one must request for detailed information on the packaging to assess its suitability for the trial.
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