Control of the micro-projectors was accomplished from a computer employing a software package specifically developed for the task.
To analyze these volumes, we used the publicly available software package IMOD, specifically developed for the visualization and analysis of EM data sets in three dimensions (http://bio3d.colorado.edu/imod/) and stereology was performed using a custom plug-in for IMOD.
Our method of ASE detection implements the DEseq package [ 22], specifically developed for RNAseq differential expression analysis, to variant specific counts.
To assess if changes were associated with improved breastfeeding and maternal health outcomes, and enhanced women's views of care, surveys of women at 10 days and three months post-birth were completed pre and post implementation of the QI intervention package using a specifically developed questionnaires.
Firstly, the evidence-based primary care [ 21] and occupational [ 22] guidelines, upon which the intervention package was based, were specifically developed for the management of low back pain rather than 'back pain' per se.
The integrated linkage analysis, including estimation of recombination fraction and locus order was performed using the windows-based package OUTMAP [ 68] specifically developed to map codominant loci in outcrossed trees with higher efficiency when compared to other existing programs, Map figures were constructed using the computer program QGene [ 69].
Several models specifically developed for RNA sequences have been implemented in phylogenetic packages [e.g. PHASE (Gowri-Shankar and Rattray, 2007) or RAxML (Stamatakis, 2006)], but these models are not widely known.
Computer systems applied in discrete manufacturing (ranging from computer-aided-technologies to image analysis systems) are now also specifically developed for and gradually adopted by the food package industry to improve efficiency in terms of material usage, operational costs, and food loss, and to allow the development of more performant and sustainable food packages.
A survey on implementation of Food Hygiene in the Italian food industry was carried out, by using a specifically developed check-list; the case of Aseptic Processing and Packaging Systems was covered.
