Sentence examples for package which implements from inspiring English sources

SCADA Pro is a structural analysis and design technical software package which implements out-of-core direct and iterative sparse parallel solvers in order to provide high performance computing capabilities in real-world structural engineering.

For the lower layers of the wireless communication model we have employed the 802.11p MiXiM package, which implements the Dedicated Short Range Communications (DSRC) standard.

The statistical and graphical functionality is provided by the R package, which implements parallelized versions of all algorithms.

The HLA allele distance matrixes were calculated for 390 HLA-A alleles, and for 711 HLA-B alleles, and used the neighbor algorithm from the PHYLIP package, which implements the neighbor-joining algorithm of Saitou and Nei [48] to generate a HLA allele distance tree.

Then, we applied the CLR function from the parmigene package which implements the CLR algorithm.

We used the DESeq package which implements the method using R. To determine a significant transcription/translation difference (Sbay/Scer ≠ 1), we applied the criteria of false discovery rate (FDR) ≤ 0.05 and fold change ≥1.5 throughout the article.

To compare waggle durations and regression slopes of different data sets, we used the same statistical package, which implemented the slope comparison test described in Sokal and Rohlf (1995) [52].

Then, we compute the tree using the Dnaml tool from the PHYLIP [ 32] software package,b which implements the maximum likelihood method for aligned DNA sequences.

Statistical evaluation of the expression changes was performed in the "R" statistical environment (version 1.091) by using the BioConductor packages "marray" [ 64] for data access and primary analysis and the package "limma" which implements a moderate t-test based on Bayesian statistic.

We also introduce an open-source Python package QCQP, which implements the heuristics discussed in the paper.

As in Davis et al.64, we used the R (R Core Team 2017) package TransferEntropy65 which implements the above equation using a nearest neighbour algorithm66.