Sentence examples for package for detecting from inspiring English sources
Hong, F. et al. RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis.
The mapping results are input into script, Maq2rlt, Soap2rlt, Ssaha2rlt, or Smalt2rlt in the SEG-Map package for detecting SNPs of the mapping individuals.
We then compared the performance of readDepth to cnv-seq, which is another R package for detecting CNAs from sequencing data [12].
Additionally, we have provided a complete software package for detecting somatic mutations in paired sequence data.
In this study, we developed the CHAP package for detecting conversion events in gene clusters, and used this computational tool for analyzing five human gene clusters.
As we observed greater variability in prediction accuracy outside this range (Fig. 1), we include a function in the massiR package for detecting datasets with skewed sex ratios using an implementation of the dip test for unimodality (Hartigan and Hartigan 1985; Maechler 2013).
In this study, we carried out a practical comparison of the state-of-the-art software packages for detecting differential expression from RNA-seq data at different numbers of replicates to guide the selection of a suitable package.
Here, we report the development of an easy-to-use software package called CHAP Cluster History Analysis Packagee) for detecting conversion events using gene cluster sequences from multiple species.
To assist the choice, we perform here a systematic comparison of eight widely used software packages and pipelines for detecting differential expression between sample groups in a practical research setting and provide general guidelines for choosing a robust pipeline.
A number of software packages currently are available for detecting QTL from marker data (for reviews, see Manly and Olson 1999; Durrant et al. 2011; Zhou et al. 2012).
Example data sets from Models 1 8 were first analyzed using the MDR machine learning method and software package that was designed specifically for detecting and characterizing high-order gene gene interactions.
