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It is particularly difficult to maintain appropriate expression of genes encoded in bacterial operons, which can be transcribed from several promoters and in which translation of consecutive genes can depend on overlapping translation signals.
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This suggests that the increased number of RY patterns overlapping with translation start sites is not directly related to the translation but rather a simple consequence of ATG and GTG themselves having the form of a short RY pattern (RYR), thus increasing the likelihood of finding a longer RY pattern at the same site.
To overcome this limitation, we designed an Nv eve morpholino overlapping the translation start site, as well as one directed at the exon intron junction in the homeobox.
Thus, while both GBV-B and HCV contain replication signals that overlap translation signals in domain II, 5'NTR sequences involved in RNA replication of GBV-B do not appear to extend into domain III, in contrast to that of HCV.
At least 31 chloroplast ncRNAs overlap the translation initiation region of a complementary mRNA.
Translation of overlapping uORFs always generates radically different peptides from those translated from the main CDS because of the difference in reading frame [ 27].
In Preibisch et al. (2009b), we identify the pairwise 3D translation between overlapping confocal image stacks by normalized cross-correlation and globally minimize the translational offset of large sets of overlapping stacks.
In this paper, we propose the explicit shrinkage formulas for one class of OGS regularization problems with translation invariant overlapping groups.
In this paper, we proposed new inexact explicit shrinkage formulas for one class of these relevant problems, whose regularization terms have translation invariant overlapping groups.
As we mentioned above, we only focus on that the weight w g is independent on the group index i, that is, w i,g =w g for all i, which means that it is with translation invariant overlapping groups.
If, however, pairing with overlapping antisense transcripts influenced translation efficiency of sense transcripts, sense/antisense gene pairs would especially benefit from alternative polyadenylation.
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