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The main reason also lies in the overlapping of clusters.
The unsupervised method of MRF provides a way to integrate spatial information into the clustering process, reducing the overlapping of clusters and the effect of noise on the result[24].
The overlapping of clusters C and D with carbon starvation, isoleucine starvation and stringent response are respectively 27, 31 and 15%, which confirm the previous figures.
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In case of overlapping clusters, the cluster with fewest organisms was included in the table.
No geographical overlap of clusters was allowed.
Using two methods, sliding 50-SNP and 5-kb windows, the CPS SNPs showed distinct clustering across large genome segments and little overlap of clusters between populations.
Spatial overlap between the atypical neuroanatomical features of autism in females and males (Fig. 2A, right) was minimal (e.g. 2.3% for grey matter and 1.0% for white matter in voxel-level P < 0.025 maps; Fig. 2B and C, purple solid lines) irrespective of the voxel-level threshold, and did not differ from simulations measuring random overlap of clusters (i.e. area between the black dotted lines).
Diamonds represent overlapping drugs of cluster 1 and cluster 3.
Here, we view clustering as the problem of searching for a minimum family of possibly overlapping clusters of reads that together cover the considered set of reads.
When applied to simulated data, it outperforms commonly used clustering methods, discovers overlapping clusters of diverse sizes and is robust in the presence of noise.
In the case of overlapping clusters after mapping the clusters were merged.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com