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In the case of uORFs overlapping CDS, the 5′ end of CDS was considered as the end of the uORF in order to avoid ambiguity in assigning ribo-seq reads to one of the two overlapping ORFs.
Additional criteria such as the codon adaptation index, CAI [ 26] were sometimes used, in particular to identify short CDS without obvious similarity or to estimate the likelihood of partially overlapping CDS.
They're really overlapping CDs that glitter in the lights.
Firstly, transcripts with known CDS were clustered into genes by overlapping CDS.
Reads partially overlapping CDS or 5′ UTR regions were included in the counts.
To conduct this analysis, the total number of all gene models with overlapping CDS was defined.
Similar(36)
Electrical currents and cellular networks were developed differently in Europe and the U.S. Consumers got burned with VHS vs. Betamax, suffered collateral damage with BluRay vs. HD DVD, and were flummoxed by the competing and overlapping CD formats such as CD-RW, CD-R and so on.
Establishing the clinical utility of genomic testing in CD will also support the feasibility of a genomics-based platform for a range of other autoimmune diseases, where both HLA and non-HLA genetic contributions are important as well, and which commonly overlap with CD [ 14].
14 LSGs have non-overlapping CDS and/or peptide hits to two or three genes that don't display any homology to each other (BLASTP, e < 0.01).
Currently, the term indeterminate colitis is adopted by pathologists when a histologic specimen shows overlapping features between CD and UC.
Diverticulitis (DD) and Crohn's disease (CD) have overlapping features including bowel structuring, inflammation, and infection.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com