Sentence examples for outputs fragments from inspiring English sources
The Inter-family option, available in the Custom options, outputs fragments that originate from proteins that are of different SCOP families or when one or both of the protein families are unspecified.
At last the output fragments are processed to plant reading errors with probability e s and empty values with probability p. In our experiments, the parameters are as follows: fragment coverage rate c=10, the difference rate between two haplotypes d=20%, the minimal length of fragment lMin=3, the maximal length of fragment lMax=7 and empty values probability p=2%.
BoBER will output query fragments contained within the BoBER database that have the same substructure present within its core structure.
When done it outputs the fragment number with the highest and second highest score and considers the read to be mapped if the ratio of the second best to best score is below.9 (chosen by empirical performance).
Other outputs include observed fragment size distribution, insertion/deletion predictions and inversion detection.
Cell suspension was sonicated 20 seconds for eight times to yield DNA fragments with average length of about 500 bp using Branson 450 sonifier, setting 4 (25% power output).
A sensible approach to satisfying data interdependencies with the purpose of minimizing, or even eliminating unnecessary file transfers would be to stage all fragments whose output must be recombined on the same site.
Other TE copies in the RepeatMasker output were considered as fragments that were not counted in the copy numbers.
PELE output of target fragment col4a6_Ex18.
Although the large cDNA fragment output was relatively low, it was adequate for the subsequent ligation reaction for cloning.
Since RepeatScout is tailored to analyze complete genomes or at least large scaffolds, its output is usually fragmented when the program is run on random sheared reads.
