Namely, (i) full text, i.e. a tools description is given in plain text, (ii) use of tags, i.e. user provided concepts and semantic types for the tools and their operations and finally (iii) parameters, i.e. inputs and outputs of a tool is specified.
Condel can optionally incorporate the output of a third tool, MutationAssessor, which is also included in this Galaxy instance.
The output of a synteny tool is a collection of families of homologous SBs (henceforth SBFs), each family tied together with homology statements.
StatsDB parsers are small programs, usually scripts, which take the output of a QC tool and use one of the APIs to store the data.
Assuming that the users have run an existing phaser, HI processes the paired-end information in the raw data to form blocks of haplotypes and compares them with the output of a phasing tool (currently HI supports PHASE and fastPHASE).
Per-residue β-sheet classification is used for this comparison since it can be inferred as a common output of all tools; however, AmyloidMutants can provide more rich predictions including super-secondary residue/residue interactions.
Quantifying uncertainty explicitly increases the value of DALY outputs as a tool in decision making, and, importantly, helps to identify gaps in knowledge for some parameters.
In practice, ignoring pairing will result in suboptimal alignments but was done here in the interest of making the output of all tools comparable.
The mails appeared to have been captured and stored as the output of a then-new tool being used to strip irrelevant data out of the agency's tapping process.
Domain monitoring techniques provide an abstract set of data, compared to the detailed, low level output of a VM introspection tool.
The output of a public query tool, as seen in figure 4, is designed to provide would-be investigators with restricted summary information regarding the numbers of specimens in the Resource.
