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Each label assignment in the pool is first evaluated as an output candidate, then selected with uncertainty for privacy consideration.
The analyses of human genomes described above have revealed a large number of In100-like elements and provide an opportunity to further investigate predicted alternative splicing patterns of the output candidate genes.
The output candidate LTR retrotransposons were extracted from the scaffolds and manually inspected.
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Similarly, we would obtain six output candidates from the Agent constituent set, and four candidates from Patient,7 making (6 * 2 * 4 48 candidate sentences in total.
For instance, in a previous, purely statistical version of our system [22] with no associated rules to limit the number of output candidates, Edit-distance scores ranged from 2.69 for a 2WL model to a maximum 1.84 for a 3WLP model using the current test data.
A dedicated algorithm was computed to automatically provide potential upstream regulators (i.e., output candidates) from lists of regulated targets (input lists).
Compared with other methods, seq2gene outputs candidate targets with detailed loci-to-gene mappings (e.g. exon, intron, CDS (CoDing sequence), UTR (UnTranslated Region), promoter and neighbor).
Hence, JAFFA is a complete pipeline; it uses de novo assembly or raw reads directly to align to a reference transcriptome and outputs candidate fusions along with associated information such as the position of the break in the genome, a prediction of reading frame, read support metrics and whether the fusion is present in the Mitelman database [ 17].
Spoken output among candidates and between candidates and examiners is also the subject of ongoing research (e.g., Tang 2014).
Furthermore, as machine vision systems are often limited to one or two wavelengths due to practical considerations including cost, exhaustive search algorithms based-on optimizing the output of candidate detection algorithms should be cost-effective.
All the information resulting from these analyses is publicly available in our website [ 43], and a sample output of candidate markers is shown in Additional file 1.
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CEO of Professional Science Editing for Scientists @ prosciediting.com