The GENOMETHREADER output was viewed and edited using the Apollo sequence annotation editor [ 31].
Each output file was manually checked and edited in order to correct errors in the automatic detection of the roots.
An output text file containing data of area, height, and size of each peak was generated and edited using a homemade perl script.
Baddeley (1986) found pre-task planning reduces the amount of cognitive load on central executive in working memory and improves the translating process through which the planned text is delivered to verbal schema within the limited time, whereas the opportunity for online planning contributes to formulating, monitoring, and editing internal output prior to composing the text.
A combination of BLAST searches with closely related genomes, Perl scripts for parsing output, and hand editing was used to define the protein and RNA genes in the unannotated genomes of Pisum sativum, Vitis vinifera, and Medicago truncatula.
By selecting "view character weights," and editing the resultant output, we constructed a file in Microsoft Excel that was sorted according to the weights, and then re-imported into the Nexus file to construct 6 partitions or "charsets" from fastest to slowest.
On the Internet, where individuals can produce and edit their own media output and consumption, readers and bloggers gravitate toward celebrity as willingly as professional journalists working for "the Machiavellian puppet masters," as Mr. Atkins refers to the moguls running the world's biggest media companies.
The project explores what it means to be vulnerable in the digital age, and the ways we censor and edit our own intimate output.
Again the output is edited by omitting irrelevant items (e.g. the seasonal component).
The protein sequences of candidate proteins were extracted and aligned using MUSCLE3.6 [ 40] with default settings and a FASTA output format and manually edited using Jalview [ 41].
