Sentence examples for origin of each sequence from inspiring English sources

Our results shed light on the relationships between the types of CagAs, the country of origin of each sequence type, and the frequency of gastric disease.

We also confirm that strains with two EPIYA segment C have a greater chance of developing gastric cancer than those with one segment C. Our results shed light on the relationships between the types of CagAs, the country of origin of each sequence type, and the frequency of gastric disease.

The taxonomic origin of each sequence was categorized as follows.

The bumblebee origin of each sequence was checked with BLAST 2.2.20 [ 88].

Since the true origin of each sequence was known, we could also calculate the number of misassigned reads (Fig.  1c).

Information about the database origin of each sequence was added to the unique identifier (i.e. OS-TA, OSEST, OSGEN for O. sativa TA, EST or genomic sequences respectively).

As the actual origin of each sequencing read and the true set of genetic variants are not known, we focused on comparing the numbers of aligned reads and variants called by the three strategies.

Then, the putative origin of each ancestral sequence (i.e. internal node) in the tree was inferred with the Fitch algorithm by finding the most parsimonious reconstruction (MPR) of the ancestral character.

Then, the putative origin of each ancestral sequence (i.e. internal node) in the tree is inferred by finding the most parsimonious reconstruction (MPR) of the ancestral character (supplemental Figure S3).

Then, the phylogenetic tree obtained from the nucleotide aligniment is imported in MacClade and the putative origin of each ancestral sequence (i.e. internal node) in the tree is inferred with the Fitch algorithm [79] by finding the most parsimonious reconstruction (MPR) of the ancestral character (this can be accomplished by selecting the Trace character option in the Trace menu of MacClade).

Additional information of the geographic origin of each individual sequence is given in Additional file 1: Table S1.