While the information contained in this review is by no means inclusive of the entire body of information available about this topic, it is to our knowledge the first attempt to integrate the results of seminal studies with more recent updates about the structure, organization and evolutionary conservation of cis-elements in rice.
Objectives: to understand further the genetic organization and evolutionary history of KSHV, especially with regard to possible new subtypes, recombinant genomes, constant region loci and clustering in particular ethnic groups or among classic versus epidemic cases in the same geographic area.
To better understand the organization and evolutionary history of the FBX superfamily in the plant kingdom, we initiated a comprehensive examination of the corresponding genes from all 18 complete or nearly complete plant genomic sequences available as of January 10 , 2010in Phytozome V5 (http://www.phytozome.net/).net/
The LTR arrays also illustrate novel composition, organization, and evolutionary processes in a tandem repeat.
We identified miRNAs based on small RNA deep sequencing along with similarity searches, and then characterized the genomic organization and evolutionary origin of the miRNAs.
This manually curated compilation contains 1987 sequence-specific DNA-binding TF genes, each with information on its function, genomic organization, and evolutionary conservation.
We showed that the human TRIM family is split into two groups that differ in domain structure, genomic organization and evolutionary properties.
Previous studies have shown that interaction dynamics is also useful in understanding the organization and evolutionary modes of biological networks [ 42, 43].
Considerable effort has been invested in understanding, for example, the functional organization and evolutionary properties of PINs, and contradictory results have been reported in the literature which are probably affected by many factors in addition to incomplete data.
Genetic mapping for non-model species with sequence-based molecular markers could provide a suitable support for the knowledge of genome organization and evolutionary studies by comparative map analysis.
A challenge arises from the fact that these reads and the resulting assemblies cannot be assigned directly to any of the genomes in the mixtures, which complicates the study of genomic organization and evolutionary diversity of these elements.
