For example, for the two networks in Figure 4, both orders (a, b, c, d) and (b, c, d, a) are circular with respect to H= D(Σ(N1))+ D(Σ(N2)) and can be obtained from the distance matrix H using Neighbor-Net.
Both ordered (A-B ≠ B-A relative to the TSS) and unordered (A-B = B-A) TFBS pairs and triplets were predicted separately, and the orientation of the TFBSs was ignored.
The columns represent the incoming states in the order A, B, C, D, and B*.
The nodes are visited in the following order: A, B, C, F, E, G, H, D, I.
Here, we describe a limit cycle itinerating over targets in the order a, b, c (abc) for simplicity.
In any given order, (a, b ) and (b, a ) cannot appear simultaneously.
In all of our discussions we will assume the markers to be on positive strand with implicit understanding that marker order (a b c) is identical to order (-c -b -a).
As a measure of fluid intelligence, we used the matrix reasoning task TONI-IV including two versions, from which the order (A, B, A or B, A, B) was balanced between the groups (age standardized values available).
Human PDI is a 57 kDa protein that contains four thioredoxin-like domains in the order a, b, b′, a′ with an extended linker (x) between the b′ and a′ domains and an acidic 19-residue C-terminal tail (c).
We distinguish two different search procedures A and B: A will be blind search, that is, each next point will be chosen at random among the remaining ones, whereas B searches in a fixed order a, b and c.
Just keep counting the lines AND spaces upward, going in the order A, B, C... Look up fingerings online on how to play a note.
