Sentence examples for order of alignment from inspiring English sources

Note that forward transitions are genomic transitions between a pair of aligned positions that lie on the same sequence (i.e. G, G′, S or S′) such that the order of alignment is preserved with respect to the alignment direction (e.g. when aligned to complementary strand order will be reverse as well).

The data is arrayed in a descending order of alignment scores.

The results of the alignment are shown in order of alignment.

The definition of the Hsf names corresponded to the order of alignment.

It is apparent that the final multiple gene order alignment is sensitive to the order of alignment steps.

In progressive alignment the usual first step is to compute a pair-wise distance matrix which is then used to make a so called guide tree, in order to determine the order of alignment of the input sequences.

The aligned ESTs do not necessarily make valid gene models (for example, the order of alignments (HSPs) in the EST may differ from the order in the genome).

If the results from different databases conflicted, a priority order of alignments from Nr, Nt, KEGG, Swiss-Prot, GO and COG databases was followed.

If you change the sequence order, you will change the cluster order and hence the order of progressive alignment.

This process is not very suitable for parallelization, because the order of the alignment calculations is restricted by the guide tree.

Most linear viewers, such as the one contained in Mauve, as well as the traditional Circos plot for genome comparison, show the order of the alignment blocks for each genome.