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Corresponding optimizations are presented for both electrode configurations.
To optimize short-range force computations in Molecular Dynamics (MD) simulations, multi-threading and SIMD optimizations are presented in this paper.
The optimization methods comprising manual and automated optimizations are presented in Section 4. The system model and simulation assumptions are given in Section 5.
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Then, the optimal Pareto fronts obtained from the optimization are presented and analyzed.
The results of the optimization are presented and discussed.
Many simulation examples of subsystem interaction and optimization are presented.
In this chapter, some additional topics that are useful for practical applications of optimization are presented.
Case studies illustrating their use in siRNA formulation development and optimization are presented.
Here, three key examples of applying COBRA methods to strain optimization are presented and discussed.
In the present paper the fundamental elements of a SBD environment for shape optimization are presented and analyzed.
The framework is outlined in detail and the results of the optimization are presented indicating the success of the procedure.
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