Sentence examples for optimization of alignment from inspiring English sources

Actually, the principle of maximum correlation of two adjacent profiles can be regarded as a local optimization of alignment.

Note that the optimization of alignment is to minimize the total alignment score due to the negative signs in Eq. (1).

That is why optimization of alignment and optimization of tree are inseparable.

Despite the optimization of alignment parameters, suboptimal or ectopic alignments occasionally occurred.

Further optimization of alignment and variant calling algorithms along with the usage of the wheat genome sequence as reference for read mapping can increase the number and accuracy of called variants.

Minor manual optimization of alignments, trimming, and management of multi-aligned data was done with BioEdit v7.0.9 [ 42].

The percentage identities were obtained from various BLAST programmes without manual optimization of alignments.

Optimization of the alignment i.e removal of variable spacer region and alignment of C-terminal region was performed using GeneDoc [ 33] The Modelgenerator [ 34] was used to obtain the model and parameters for the likelihood analysis for the alignment of VerFtsZ and FtsZ.

The use of multiple genome indices and optimization of the alignment phase parameters (see below) is the basis of the enhanced detection of conserved sequences between evolutionarily distant orthologous DNAs.

We describe a procedure of optimization for alignment and a new coding method for nucleotide sequence data using secondary structure models of the D2 and D3 expansion fragments of the LSU-rRNA gene reconstructed for fifteen nematode species of the agriculturally important and diverse family Hoplolaimidae, order Tylenchida.

This paper concentrates on the optimization of parameters of alignment marks to achieve the resulting moiré fringes with an optimum contrast.