Sentence examples for optimal box size from inspiring English sources

The optimal box size used for 3D reconstruction may be variable for particles with different sizes and/or symmetry.

Thus far, we established a protocol for calculating the optimal box size for molecular docking that gives the best accuracy in binding pose prediction.

We note that the optimal box size is calculated directly from the R g of a docking ligand, thus it can be obtained for an arbitrary compound.

Conversely, for an assumed flux of water through it, there is an optimal box size, defined by the time step duration and the characteristic diffusion length.

A script for calculating the optimal docking box size is freely available at www.brylinski.org/content/docking-box-size.

Depending on the evaluation metric, the optimal docking box size gives better ranking in virtual screening for about two-thirds of target proteins.

We propose a new procedure for calculating the optimal docking box size that maximizes the accuracy of binding pose prediction against a non-redundant and representative dataset of 3,659 protein-ligand complexes selected from the Protein Data Bank.

The optimal handle positions depending on box size and handling position were suggested based on the results of the evaluation.

ROC curves for the red spectrum at intermediate maximal box size are shown in Fig. 3, with the optimal points highlighted.

Box size denotes relevance.

The box size is 1 Mpc (comoving).