Sentence examples for optimal alignment with from inspiring English sources

When aligned sequences contain two SVs (either insertions or deletions) an optimal alignment with two unaligned regions must be found.

Percent similarity calculations were performed using pairwise optimal alignment with Bioedit software (Clustal W, matrix blosum62).

Each reference pattern (R) was scaled in the intensity dimension to produce an optimal alignment with the data (D).

Findings will be used to influence university curriculum for medical and allied health students to ensure optimal alignment with evidence.

From this five chambers view, the beam was tilted in order to obtain an optimal alignment with aortic blood flow.

Most multi-alignment programs are using heuristic optimisation algorithms, i.e. they are, in general, not able to find the mathematically optimal alignment with respect to the objective function.

For the biological query networks we considered, the optimality gap was closed and provably optimal alignments with respect to the used score function were thus found.

In this paper, we propose an efficient method by using multi-objective genetic algorithm (MSAGMOGA) to discover optimal alignments with affine gap in multiple sequence data.

Some conformers may have different optimal alignments with a reference shape due to structural symmetry; however, the presence of multiple reference shapes greatly increases the chance of finding an alignment very close to the analytical maximum overlap solution.

H-GRAAL, on the other hand, finds optimal alignments with respect to the total NCF by using the Hungarian algorithm to solve the linear assignment problem.

The purpose of our work was to determine conditions of preferred applicability of the local and global versions of the algorithm for determination of optimal alignments with an affine penalty function for indels [ 22].