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We applied the FAME (Functional Assignment of MiRNA via Enrichment) algorithm [23], a recently developed miRNA functional analysis tool, on our transcript and protein datasets.
Based on our transcript mapping and reference gene information, we adjusted the genomic locations of TSSs.
Based on our transcript information, it is more likely that both ATS1 and ATS3 genes may have a regulatory role during early SE.
Similar(57)
There is little doubt (based on our earlier transcript and protein-based analyses: Heighway et al, 2002) that S100A2 is very strongly expressed in the majority of primary NSCLC lesions.
No GRX sequences from acarines were found on GenBank, yet our transcript appears to cluster with other arthropods including an Aedes ægypti glutaredoxin (EAT33643.1) to which it is most homologous.
From the over 1,613 transcription factors represented as probes on our microarray, transcripts for 734 genes could be detected at a signal intensity above background.
Among the 343 ROS response-network genes spotted on our arrays, transcripts of 270 showed changed expression after FA treatment (Additional file 8: Table S4): 55 were significantly regulated, 51 upregulated and four downregulated.
Based on our high-throughput transcript sequencing data, MTPs might yield slightly better coverage of expressed sequences than oligo-dT.
It is interesting to note that the trends shown in Figure 3, which are based on our analysis of transcript levels, are—on the whole consistent with published data on the corresponding gene products.
The other transcripts on our list of nuclear-enriched transcripts also may have adenosine to inosine editing sites, but these sites remain to be identified.
Once we had decided on our target HEIs, transcripts were gathered from our internet search of 'employability' and sorted in institutional order (from top to bottom according to the published rankings).
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com