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**Analysis only allows identification on order level.
Additionally, we computed the Shannon Diversity Index per site on order level, based on the insect orders which occur in the study region.
Fig. 5 Variation of crop height, insect diversity (on order level), and insect abundance from June to September 2012 on 53 arable fields where the insect and bat monitoring was conducted.
Both organisms have been included in NCBI in 2011 and are unique at the rank of order, i.e. there are no overlaps on order level (and below) with the used reference organisms.
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Most of the sequences belonging to the second most abundant phylum Alphaproteobacteria across all samples were affiliated on the order level to the Rhodospirillales in forest soils and to Rhizobiales in grassland soils.
On the order level, the Hypocreales (121, 34.8%) and the Pleosporales (70, 20.1%) were most highly represented.
We justify the choice of k=4 providing experimental evidence in Table 3 by focusing on the order level since similar performance is obtained at other levels.
Here, we provide a comparison on the order level of the evolutionary history of genes related to biosynthesis, usage, and regulation of a vitamin.
Since our phylogenetic analyses were focused on the order level or above, and in order to maximize the completeness of the nuclear and combined data sets, sequences from related species/genera/families/superfamilies (for which there is strong evidence for their monophyly) were merged in some instances (see Additional file 1: Table S2; [ 24]).
On the gene order level, homologous regions can even be found between distantly related genomes, which do not align on the nucleotide sequence level.
The concept starts with first order objects (e.g. protein coding genes), based on interaction forming higher order structures (functional categories, pathways), which in turn exhibit properties not identified on any lower order level.
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