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In addition, results of two laboratory-based surveys of antimicrobial resistance, one conducted on isolates from Western Australia and one conducted on isolates from the Australian Capital Territory, are included.
The criterion for intermediate susceptibility was based on isolates growing within one-fold dilution higher than the MIC value.
Previous population genetic studies on isolates from M. indica in Oman and Pakistan have shown that the pathogen represents a single clonal haplotype, indicative of an introduced pathogen.
Thus, the description in this study is based partially on isolates recovered from the 1990s.
Thus, the following description is based partially on isolates from the 1990s.
The RD4 deletion typing was carried out on isolates that showed band for M. tuberculosis complex by multiplex PCR.
The absence of RD1 and RD2 was also confirmed on isolates of different origins (Figure S1 of the supplemental data).
The first-line drug susceptibility testing was routinely performed by the absolute concentration or proportion methods on isolates of M. tuberculosis [10].
Although this study was largely focused on isolates obtained from a single time and place, it recovered strains that spanned the known range of E. coli phylogeny.
The description in this study is based on COL and on isolates recovered from hospitalised patients in Ireland in the 1970s to 1980s [15].
Despite this geographic limitation in its design, this scheme has been used successfully in field studies on isolates from Brazil and South Africa [24], [25].
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