In contrast, the great majority (89%) of cHOGs was associated with one or more COGs and KOGs, and a large fraction, 69%, was assigned to a functional class based on this criterion.
In this section we concentrate on the study of two maps closely connected with diagonal mapping from subframe into disk where all and another map from expanded disk into disk where and function is from a functional class on subframe or expanded disk.
Each cluster was assigned a putative function and placed in a functional class based on the sequence homology to molecules identified by the BLAST results from the NCBI non-redundant protein, the Gene Ontology, the conserved domain, rRNA and mitochondrial databases.
In our studies on neurotransmitter metabolism we have focused our efforts on transporters, a functional class of proteins that move neurotransmitters and other small molecules across membranes in cells.
By clicking on the one-letter functional class code, a page displaying a list of all proteins classified in this specific category is presented, with links to the corresponding BLAST alignments.
For each functionally characterized protein its classfication in one of 13 functional classes based on a modified version of the Riley scheme [ 21] was obtained from the same source.
It is not surprising that different classification systems for transport proteins have arisen, be it within a specialized database, focused on this functional class of proteins, or as part of a broader classification system for all proteins.
Lacking existing counts of cyclists and pedestrians, we chose count sites based on street functional class and centrality (a measure of trip potential).
We stratified candidate mutations based on their functional class by giving a priority to frameshifts, stop codons, and disruptions of canonical splice sites variants [ 28].
In this paper the thermodynamic consistency of the model is investigated obtaining some restrictions on the functional class of the distance decaying function that rules the strength of the long-range thermal energy transfer.
The parameters underlying the CAI model rely on the codon composition of only a limited set of highly expressed genes and are based on a fairly simple assumption that the functional class of genes are highly expressed.
