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We introduce a new algorithm specifically optimized for this task, as well as a freely available implementation, BFAST, which can align data produced by any of current sequencing platforms, allows for user-customizable levels of speed and accuracy, supports paired end data, and provides for efficient parallel and multi-threaded computation on a computer cluster.
All the experiments are performed on a computer cluster with 43 compute nodes, each of which has 16 Intel XEON E5520 (2.26 GHz) CPUs and 11.7 GB RAM.
Using a non-linear kernel proved to be infeasible for large data sizes, even with substantial computational resources on a computer cluster.
The PetDetSim environment is designed to use on a computer cluster and in a grid computing environment in order to reduce the computation time of the simulation.
The coupled thermo-hydraulic numerical simulations were performed on a computer cluster due to the high computational cost of the resulting models.
On a computer cluster, the human genome could be computed in a day.
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It is common that analyses consist of multiple software tools applied in a sequential fashion on input data; and these analysis steps are usually executed on a server or a computer cluster given the significant data size and computation time requirements.
The various algorithms are deployed on different hardware systems including a computer cluster.
Hi-Corrector can run on any single computer or a computer cluster with limited memory size to complete the task.
Such program is aimed to run on a GPU-Cluster, that means, a computer cluster in which the nodes are provided with programmable Graphics Processing Units (GPU).
The simulations of the HRTF were run on the CalcUA (http://www.calcua.ua.ac.be), a computer cluster consisting of 256 nodes running BEM3D acoustic simulation software [18], [39], [41].
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com