Sentence examples for omitting genotypes in from inspiring English sources

Rare alleles constitute an important component of the molecular signature used to estimate several population genetic parameters, and so omitting genotypes in which rare alleles reside could affect phylogeographic analyses.

Here we have shown that omitting genotypes with low confidence probability scores usually leads to reductions in two components of phylogenetic diversity-the number of gene lineages and pairwise sequence divergences among them.

For one of these sites, we called genotypes in all samples, and for two others, we omitted genotypes for one sibling of the recipient but called all other samples.

In this second analysis, we omitted genotypes for which the presence of the fitness QTL was ambiguous, either due to missing markers or a recombination event in the QTL interval.

In these cases, current practices of omitting unresolved genotypes should have greater impacts on analyses than those seen from simulations performed under a model of constant population size.

We have shown that the current practice of omitting unresolved genotypes (i.e., those that cannot be resolved with high confidence using computational approaches implemented in PHASE) introduces systematic bias into estimates of important population genetic parameters.

The genotypes of one unaffected animal were omitted because genotyping failed in more than 10% of SNPs.

In addition, 8 subjects with missing values for 2 or more genotypes were omitted in the analysis of DNMT1, DNMT3A, and DNMT3B genotypes and haplotypes and LINE-1 methylation index.

Subjects harboring missing genotypes were omitted in the analysis of individual SNPs and haplotypes.

Subjects harboring missing genotypes were omitted in the analysis of individual single-nucleotide polymorphisms and haplotypes.

Missing data are handled by omitting individuals with missing data in the genotype counts; e.g. all individuals with missing data in either rs3738579 or R462Q are omitted when calculating the genotype frequencies of that specific SNP-pair.