Your English writing platform
Discover LudwigSuggestions(2)
Exact(60)
The scale on the bottom of the dendrogram indicates the degree of dissimilarity.
The only node without the parent is the root node of the dendrogram.
Whereas in the case of the dendrogram plot, structures are represented by vertical lines at the bottom of the plot.
"distance": 3.32, //distance from the zero base of the dendrogram, given by the distance measure used for clustering.
A two dimensional depiction of the molecular structure is attached to each leaf node of the dendrogram.
Moreover, one can observe a branch at the topmost level of the dendrogram, containing only two conformers.
Clusters composed of only one structure are drawn as a black line reaching the bottom of the dendrogram.
The framed part of the dendrogram shows a cluster of 125 similar mass spectra originated by polymer contaminations due to avidin column purification steps.
The reliability of the dendrogram was tested by bootstrap analysis with 1.000 replicates using MEGA 6.0 (Felsenstein 1985 and Tamura et al. 2013).
The lowest level of the dendrogram is composed of single-structure clusters, so that the x axis corresponds to individual configurations sorted according to the clustering procedure.
For the generation of the dendrogram, the RMSD (Root Mean Square Deviation) distance coefficient has been used to compare between sets of variables.
Write better and faster with AI suggestions while staying true to your unique style.
Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com