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This is more suggestive of parallel gains.
However, the distribution of parallel gains over the phylogenetic tree of eukaryotes is highly non-uniform.
Generally, the distribution of parallel gains in comparisons of specific clades is, obviously, more informative than overall counting (Table 1).
The results indicate that, although the contribution of parallel gains varies across the phylogenetic tree, the high level of intron position sharing is due, primarily, to evolutionary conservation.
Qiu et al. [ 17], using a Bayesian modeling of intron evolution, found that most introns shared between distantly related species are results of parallel gains.
This led to at least 23 occurrences of parallel gains, counting parallel gains as the number of gain events at a given intron position, minus one.
Similar(49)
We use a Web-survey platoorm to compare the willingness to invest in LOSS-GAIN deposits that pay positive return G in favorable market conditions, but bring a loss L in the complementary states, to the valuation of parallel GAIN-ONLY deposits that pay small positive return G-|L| in the favorable scenario but bring zero return in the opposite case.
Using our probabilistic model, we developed a rigorous measure for assessing the amount of parallel gain of introns.
Perhaps this argument is similar for "mixed" introns, but the likelihood of parallel gain seems reasonably tenable.
We obtained robust estimates of the contribution of parallel gain to the observed sharing of intron positions between eukaryotic species separated by different evolutionary distances.
A study claimed that the majority of introns shared between distant species were the result of parallel gain into these sites [ 25].
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