This does not only apply to the monocot databases, but also to the dicot databases (Table 1, Figure 3) in spite of the relatively low number of overall alignments derived from the latter [see Additional file 2 Tables 1 and 2].
Location of the center of the femoral head (FHC) intraoperatively is useful in assessment of the overall alignment of the lower limb during TKA.
Figure 4(A D) shows the distributions of the overall alignment quality scores obtained by each MSA program for each global attribute.
Three global alignment programs [ 14– 16] were employed to verify the accuracy of the overall alignment.
A minimum of 5 nt overlap per flanking junction sequence was required for alignment to be considered, selected on basis of maximizing overall alignment sensitivity (data not shown).
Thus, we aim to reconstruct the full consensus only at SNP positions, filling in non-SNP loci with the majority vote of the overall alignment.
Sequences at the ends of each overall alignment were trimmed to give 99-aa segments centered on a tripeptide encoded by an uptake sequence.
We therefore recommend an initial approach of restoring and maintaining the overall alignment of the ulna and DRU-joint with the later option of a salvage procedure depending on the final result.
