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Fig. 3 Changes of equivalent positions of a nickel atom in subnanocluster at different positions of a carbon atom.
These individuals, the "nation's best," must be tenured or tenure-track faculty members or holders of equivalent positions at one of approximately 200 institutions specified by Hughes.
In contrast to simple structural superposition, where at least some equivalent residues of the two structures are known, structural alignment requires no a priori knowledge of equivalent positions.
Only two intron positions were found, both in phase zero, and located at conserved positions, 192 (intron 1) and 336 (intron 2) of BX2 (hereafter all amino acid positions are given in terms of equivalent positions of maize BX2).
These amino acids were selected based on previous reports showing the role of equivalent positions in other members of the Lox family for enzyme activity (Lopez and Greenaway, 2011; Lugassy et al., 2012; Herranz et al., 2012; Xu et al., 2013).
The total chaining score is then combined with the probability of obtaining a greater score, the RMSD of the final superposition, the number of equivalent positions, and the number of twists (with a maximum of five), to give a measure of the structure's significance.
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Also, the possibility of transferring the mutation to equivalent positions in homologous proteins through an MSA and the mapping into the desired protein structure with the Jsmol app (15) are unique features of our database.
Although kinase cancer mutations may not exhibit a strong sequence conservation signal, we have identified a number of structurally equivalent positions within the protein kinase catalytic core can be frequent targets of tumorigenic mutations.
Another type of disorder is when some moiety (typically solvent) is present only in a fraction of the equivalent positions in the crystal, the other being empty: the SMILES specification does not allow for fractional presence of moieties, hence the amount of this solvent molecules must be "rounded up" in the SMILES string.
An intriguing conserved sequence element of ~300 bp is present in equivalent positions of the variable region of the T. cruzi CL Brener and Esmeraldo strains.
These additional CuBr fragments can be treated as further support for the scaffold of 2-Br, because, in the absence of Cu and Br atoms in all of these twelve symmetrically equivalent positions, the integrity of the supramolecule is retained.
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