Sentence examples for of consecutive base from inspiring English sources

A bound molecule will occupy a number of consecutive base pairs on the DNA.

There is suggestive evidence that miRNA/target interactions require a series of consecutive base pairs between the 5' part of the miRNA and the target [ 7, 23- 28, 36- 38].

When a molecule binds to the DNA it will occupy a number of consecutive base pairs on the DNA and no other molecule will be able to bind to the DNA at that position.

A certain length of the stretch of AT base pairs is required for fast intercalation: a dramatic drop in the threading rate was observed when the number of consecutive base pairs (bp) with alternating AT sequence was decreased from 14 to 10 bp, and no threading seems to occur for a stretch of six AT base pairs.

A previous work about sRNA target prediction suggested that the interaction of sRNA and mRNA also starts with a stretch of bases that are unpaired in the sRNA and the mRNA and that form at least a minimal number of consecutive base pairs (Tjaden et al., 2006).

Hence, each < i, j, t> is a set of consecutive base pairs as follows; < i, j, t > = r i, r l - j + 1, ⋯, r i + t, r l - j - t + 1, According to the prior knowledge, we know that Watson-Crick base pairs occur more than Wobble in RNA structures.

Aggregate data recovered 117,913-170,667 singleton target-base positions (Fig. 3b); the average-size of consecutive bases recovered was ~50 bpositionsb).

In our approach, each sequence is first split into several blocks, each of which consists of the same number of consecutive bases.

Each incorporation releases an ion, so that the change in pH level indicates whether incorporation occurred and, if so, the number of consecutive bases incorporated.

Therefore, their weight matrices were computed by ERPIN using a lod-score for each pair of consecutive bases at positions i and i+1 [ 15]: Where Oi,i+1 is the observed frequency for the pair of consecutive bases at position i and i+1, and Ei, Ei+1 the expected frequencies of individual bases.

While mis-joining can be minimized by increasing the number of consecutive bases that must match, doing so reduces the number of useful sequences and raises the risk of failure to join sequences that represent the same gene, but are slightly different due to errors or allelic variation.