Sentence examples for of a given read from inspiring English sources

Thus, in terms of the alignment matrix of a given read against the SV region we count the k-mer hits by alignment diagonal (Fig. 5).

All candidate split-reads with at least two diagonals above the k-mer hit threshold are further processed by means of sorting the diagonals of a given read by their diagonal index and recording the offset between two consecutive diagonals.

Finally, we analysed each batch of 10 independent samples of a given read depth altogether using the cn.MOPS software and compared the results to those obtained from the analysis of each individual sample.

During mapping we allowed mismatches (replacements) that comprised not more than 4% of a given read's length; we did not permit any insertions or deletions.

The exhaustive overlap algorithm exhibits the expected above-linear scaling as the number of overlaps for a given read grows quadratically with sequence depth.

Recall from Section 2.3 that the labels of the irreducible edges for a given read are prefixes of the labels of transitive edges.

To address this issue, we propose an automatic estimation of Q according to a given read length.

Typically, their seed sets are often the outcome of manual optimization procedures for a given read length and number of mismatches.

Nonetheless, amongst prokaryotes, there exists considerable variation in the absolute number of gaps at a given read length, and genome length is a poor predictor of this.

Mapping quality (MQ) is a measure of confidence in a given read alignment, given the information available in the reference genome.

The algorithm accurately predicts the vast differences between the genomes in terms of the number of gaps observed at a given read length.