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The Peruvian dataset contained 69 variable nucleotide positions, with a maximum of 7.3% nucleotide variability in all pairwise comparisons (average of 4.03%).
Together, they amplify regions capturing almost half the nucleotide variability present in the complete mitochondrial genome.
Nucleotide variability in the core promoter region may be one of the factors linked to hepatitis B disease activity.
Nucleotide variability in 5′ upstream region of TLR4 gene was identified by PCR-RFLP and subsequent sequencing.
Nucleotide variability was investigated and a total of 139 nucleotide changes were found in the LacS gene while 40 nucleotide changes were found in the sequences of the LacZ gene.
This was not the case for the Atlantys RTs as in the case of O. alta were the copy number is elevated but the nucleotide variability is not.
Two measures of nucleotide variability, the average number of nucleotide differences per site (Beverley et al. 1987) and nucleotide diversity based on the proportion of segregating sites (Watterson 1975), were obtained using DNASP v5.0 (Librado and Rozas 2009).
Regarding H. chilense intraspecific nucleotide variability, most of the polymorphisms are found in the intronic regions, as expected.
This value obtained corresponds to the degree of variability at each position and, hence, a low value corresponds to low nucleotide variability at the position.
A similar approach was adopted for analyzing the nucleotide variability of dif in 19 out of 20 multi-chromosome species (listed in Table S3).
As shown in table 3, some genotypes/subtypes were detected with more than one probe, due to the level of nucleotide variability even within subtypes.
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