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ClinSeK also implements a refined duplicate read marking algorithm that is aware of not only alignment positions but also base identities and qualities (Additional file 1).
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In strap-down gyro-compass in-motion alignment, the alignment accuracy depends not only on the quality of the gyroscopes and accelerometers, but also on the accuracy of the velocity provided by the aiding sensors such as odometers.
These results suggest that the contigs should be assigned to virtual barley chromosomes not only by alignment with the shotgun genomic reads, but also by alignment with Brachypodium and rice protein sequences.
The lack of performance concerns not only the alignment problems, but may be observed in many areas of biologically related research.
Drawing not only increases alignment but also the fraction of graphitic planes forming coherent domains capable of taking part in stress transfer by shear; thus increasing both tensile modulus and strength.
Laser link experiments may be useful not only for alignment measurement but also for performance checks, demonstrations of optical communications, and time transfer to spacecraft from well-calibrated clocks on the ground.
The powerful witness of a mainline denomination ending marriage discrimination is not only in alignment with the core American value of equality but a manifestation of the Gospel value of God's inclusive love.
The result is not only an alignment but a consensus structure that depicts residue conservation as a distribution of amino acids and amino-acid categories.
The mutations used are fixed frequently during evolution, as deduced not only from alignment analysis, but also from their non-negative coefficient values in the PAM250 substitution matrix, which range from 0 (D/A, Q/A and A/V substitutions) to 7 (the Y/F substitution).
Thus, the end goal of translational photometric alignment is not only to align image sequences, but also to produce the best surface-normal estimates given the observed images.
A plausible explanation is that, in mapping paired-end reads, the hit(s) of a read is determined not only by its alignment with the genome but also by the alignment of its mate read [ 46].
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