Sentence examples for normalization option from inspiring English sources

BeadStation 5003 data were extracted using the cubic spline normalization option of BeadStudio Version 1.5.1.3 (Illumina).

When a bias is present the AU normalization option will diminish the correlation between AU composition and gene expression changes (Figure 3a, 3b).

Expression data were median centered by using the GeneSpring normalization option.

We used the upper quartile normalization option in order to improve the accuracy of the abundance estimation.

For individual microarrays the intensity of the two fluorescent channels were normalized to the mean of ratio of medians of all unflagged features using the Genepix Pro 4.1 normalization option.

Also included in this model is a custom EQ and volume normalization options.

and various normalization options are available.

Sequencing reads from all 36 libraries were combined and assembled de novo using the Trinity software (version 20140717) [ 54] with the read trimming and digital normalization options.

Next, the data quality of a screen can be assessed conveniently using multidimensional scaling (MDS) plots via plotMDS and access to a range of normalization options is available through the calcNormFactors function.

The normalization options in both Mayday and MeV are very limited: While MeV includes basic scaling and various transformations, there are for example no specific tools for normalizing Affymetrix raw data (CEL files).

The package provides a wide variety of normalization options and they have compared 15 types of preprocessing methods in which they found their own Dasen method as the most effective.