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965 newly annotated ORFs were found, and the annotation of 288 hypothetical proteins was confirmed.
We create the distribution of these correlations between newly annotated gene pairs for which we predict GO annotations.
About 90% (452/510) of these newly annotated genes had EST support, which is much higher than that of the existing annotated genes (Table 2).
In addition, a large pool of newly annotated P450s has attracted much attention as a source for novel biocatalysts for oxidation.
Exact phylogenetic analysis, revealed ucp2-like (ucp2l) genes are newly annotated and only found in fish (Fig. 3).
The completion rate of CDS in the newly annotated genes was more than 84% (n = 13,426).
To identify the FBXD region in previously or newly annotated FBX protein sequences, we used HMMER3 to search each protein sequence against PFAM database (E-value <1).
(XLSX 22 kb) Additional file 3: Amino acid sequences of newly annotated type I PKSs.
These were used to create new search queries incorporating the newly annotated MeSH terms.
These newly annotated receptor kinases were assigned with one asterisk in Additional file 1.
About 21% (109/510) of the newly annotated genes spanned two or more contigs.
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Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com