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Compensation for nucleotide constraint occurs in a network of correlations whose final product is purine bias regardless of the GC composition in the third codon position.
For example, seeding the posterior cerebellum (Crus I) produced a distributed network of correlations similar to the default network, including MPFC, the inferior parietal lobule and the posterior cingulate (Fig. 7).
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In Figure 5, networks of correlations among proteins from the MAP kinase cascade are shown.
The resultant graph was large and highly structured with one large component of 19,708 nodes and 90 smaller components (unconnected networks of correlations) of between 57 and 5 nodes (20,352 probesets in total, that is, just under half the transcripts represented on the array).
A recent extension of STOCSY termed cluster analysis statistical spectroscopy (CLASSY) has focused on using the network structure of correlations to resolve local clusters of tightly correlated peaks.
Tumminello et al. (2010) show that financial markets present networks of correlation and hierarchies that express dependence among similar assets.
The presence of networks of correlation between regional gray matter volume as measured across subjects in a group of individuals has been consistently described in several human studies, an approach termed structural covariance MRI (scMRI).
This allowed building networks of correlation between the lncRNAs and the 38 remodeling genes.
Cytoscape (Version 2.7.0) [ 44] was used to visualize the co-evolutionary networks identified by CAPS, and to generate the networks of correlation between co-evolving amino acids.
The performance of ENIGMA is tested on two levels by assessing the overlap between the artificial input correlation network and (i) the network of significant correlations obtained in the first step of the ENIGMA algorithm (before clustering, referred to as ENIGMA-N); (ii) the modules inferred by ENIGMA (ENIGMA-M).
In As, a large network of fair correlations was found with some superposition for that of Hs, but high correlations were distributed differently (Table S4).
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