Sentence examples for network compendium from inspiring English sources

The net effect is increase sensitivity thus maximizing the total co-expression relationships in the final co-expression network compendium.

We constructed two separate networks from the compendium of human complex diseases and their associated genes.

We inferred regulatory relationship networks using this compendium and discovered that genes with high betweenness centrality, so-called bottlenecks, code for proteins targeted by pathogens.

In order to differentiate the mediators of innate immunity from downstream effectors, we first inferred coexpression networks from a compendium of high-throughput datasets examining macrophage response (as described in Methods).

Functional association networks represent the compendium of all possible associations in a cell.

However, most networks in this compendium are context-specific: they describe only the functional relationships predicted to occur at a specific time or in a specific tissue.

Some of these are designed to infer networks from a compendium of perturbation experiments while others are able to use time course data to develop dynamical models of gene interaction.

The elucidation of networks from a compendium of gene expression data is one of the goals of systems biology and can be a valuable source of new hypotheses for experimental researchers.

Variables included: (i) Testing conditions – exposure time and concentration and (ii) Network training conditions – training compendium modifications.

Several metabolic processes could be also identified as coherent subnetworks in the recent analysis of Arabidopsis gene network, based on the compendium of the expression profiles [ 29].

For A. thaliana, these networks represent the largest compendium to date of significant gene co-expression relationships, and are a means to explore complex pathway, polygenic, and pleiotropic relationships for this focal model plant.