Sentence examples for neighborhood sequence from inspiring English sources

If the sliding window is too small, the prediction accuracy would suffer from the loss of neighborhood sequence information; on the contrary, if it is too large, much redundant information will be included especially for the cases of short TMHs.

On the other hand, if L is too small, the prediction accuracy generally suffers as a result of losing the neighborhood sequence information.

Evolutionary conservation of genomic neighborhood, sequence, and gene expression clearly supports the evolutionary constraints of transcription-associated chromatin proximity.

To decide whether a motif score is significant, we randomly drew 20 matched control sequences from the mm8 genome using the CisGenome program [ 33] for a neighborhood sequence.

In turn, the new genomic environment attained by the duplicate copy may accelerate the path to nonfunctionalization if it fails to acquire a new promoter and/or complete its truncated reading frame by recruiting new neighborhood sequence.

For every control sequence, its length and distance from its center to its closest gene's TSS matched the length of the neighborhood sequence and the distance from the neighborhood center to the TSS of the gene closest to the neighborhood, respectively.

Our analysis uses the concept of a protein's neighborhood in sequence space, a region comprising all sequences up to some maximal distance from the protein.

Such phenotypes can be encountered through (neutral) exploration of a genotype network and its neighborhood in sequence space.

The number resulting from the neighborhood bit sequence corresponds to the LBP number.

Despite the improvement in mseq, it is oversimplified to just consider the neighborhood nucleotide sequence information alone.

In particular, to estimate more accurately the probability that two residues should be aligned, it uses neighborhood information both sequence and structure.