Sentence examples for nearest sequences from from inspiring English sources
Most of these MYB genes are clustered in a phylogenetic tree of MYBs from spruce, Pinus, Arabidopsis, and the nearest sequences from other species [ 78].
The homologs clustered closely in a group with a Pinus homolog in a phylogenetic tree of actin from Arabidopsis and the nearest sequences from other species [ 110].
The msp1 sequences obtained from human isolates collected in the Atlantic forest were also clustered in a clade that was positioned near sequences from simian isolates obtained in the Amazon Region, forming a well-supported clade with a high support value.
Within Betaproteobacteria, the clade associated with Fulgoroidea hosts was recovered as monophyletic, and included Vidania (sequenced from Cixiidae by Gonella et al. [ 23]) placed near sequences generated from exemplars of Cixiidae.
This result is consistent with the gene being horizontally transferred from Clostridia after divergence of M. labreanum from its nearest sequenced relatives.
There are many species for which a genome sequence is still a valuable and desirable resource and that are too distant from a nearest sequenced relative to take advantage of resequencing strategies.
A study using a Bayesian classifier found that as many as 5.5% of near full length sequences from well-characterized species were taxonomically anomalous at the level of genus in a test against the RDP [7].
Advances in DNA sequencing technologies have made it feasible to obtain near-complete genome sequences from thousands of individuals.
The sturgeon alpha 2 domain sequence is assembled from the near identical sequences primarily from Acipenser persicus (SRA dataset ERX145719; ERR169830.5438448.2, ERR169830.5438448.2, and ERR169830.5083693.2), with a 10 bp gap filled using a Acipenser gueldenstaedtii sequence (SRA dataset ERX145720 sequence ERR169831.3185933.1).
Our reconstructed near entire CO1 sequences were identical (or near identical) to CO1 sequences from DNA barcode databases for all species, including M. ascalonicus.
The presence of the exogenous DNA in this sequencing run was evident from the near sequence identity of a number of contigs with the high-GC fraction of C. remanei and also from the analysis of k-mer coverage distribution (Fig. 3).
