Notably, the oligonucleotide compositions of the SRI-generated sequences are very close to those of the natural sequences, with only small fluctuations due to the inherently random nature of the sequence generation process [see Additional file 1].
This means that random page attacks generate disordered sequences, while other attacks generate natural sequences by mimicking normal behaviors.
Thus, they help explain why in natural sequences, inserts after canonical heptad repeats most commonly comprise 4 residues.
Its performance is investigated and evaluated with synthetic and natural sequences and compared with the mean-shift tracker.
Experimental results on synthetic, realistic, and natural sequences verify the effectiveness of the main algorithm and our arguments.
The construction of large DNA molecules that encode pathways, biological machinery, and entire genomes has been limited to the reproduction of natural sequences.
Understanding the fundamentals of G-quadruplex formation is important both for targeting G-quadruplexes formed by natural sequences and for engineering new G-quadruplexes with desired properties.
The relative applicability of diverse promoter development strategies are discussed, including re-engineering of natural sequences, design of synthetic transcription factor-based systems, and construction of synthetic promoters.
Transportan, MPG and Pep-1 are chimeric peptides (∼30-mers) that are formed by the fusion of two natural sequences derived from galanin/mastoparan, HIV-gp41/SV40 T-antigen and HIV-reverse transcriptase/SV40 T-antigen, respectively.
We identified more than 100 unique sequences for a β-bulge motif, which was significantly more informative than natural sequences of the FN3 family in revealing the sequence determinants for the β-bulge.
To analyze their ability to link proteins in homology searches, we used 3024 queries to search two databases, one containing only natural sequences and another one additionally containing designed sequences.
